# HP arabidopsis input file for BalGroCP ver 4.6
# Corrected p.Pavail values for SRL
name	value	comments
p.repmax	1	max rep allocation
p.senb4rep	0	can senescence begin before reproduction (1=Y, 0=N)
p.lim	10	limit on veg-rep trans length
# p.boostdays	30	length of initial foraging advantage
# p.boost	0	fractional efficiency boost
p.inirep	60	Age at initiation of reproduction
p.termveg	90	Age at termination of veg. growth
p.agsen	90	Senescence initiation
p.rtCPratio	80	 C:P for roots
p.stmCPratio	60	 C:P for stems
p.lfCPratio	60	 C:P for leaf
p.repCPratio	60	 C:P for rep
p.sdCPratio	70	 C:P for seeds
p.stemprop	0.05	proportion of shoot which is stem
p.Pavail	0.0235	P availability (mg Pup/mg RtC) for new roots
p.rteffmin	0.968	min root efficiency (proportion)
# HP, [P] = 20 uM, b = 200, mintime =15					
#DE	1.00E-09	3.00E-09	1.00E-08	3.00E-08	1.00E-07
#min	0.7		0.903		0.968		0.985		0.9865
#max	2.20E-02	2.29E-02	2.35E-02	2.37E-02	2.38E-02
p.rteffmintime	15	time to reach min (days)
# p.Cavail was 0.463
p.Cavail	0.463	C fixation rate (mg Cfix/mg ShtC) for young shoots
p.shteffmin	0.01	min shoot efficiency (proportion)
p.shteffsteep	0.3	steepeness (values around 0.1 are quite smooth and gradual)
p.shteffhalf	20	when decline is halfway to min (days) 
p.rshteff	0.15	C fixation efficiency of reproductive tissue
# p.shtold	28	shoot (leaf) counts as old (s.shtold must be same)
# mr was 0.0643, 0.0429
p.rtmr	0.0643	Root maint resp (mg/mgC/d)
p.stmmr	0.0643	Stem maint resp (mg/mgC/d)
p.lfmr	0.0643	Leaf maint resp (mg/mgC/d)
p.repmr	0.0964	Rep maint resp (mg/mgC/d)
p.grresrate	0.1932	growth resp (mg/mgC/d)
p.daysd	10	Time lag to mature seed (d)
p.repeff	0.39	Rep efficiency (% rep C,P to seed) # 0.39 is HP
p.MRp1	0.1	steepness
p.MRp2	79	half-max
p.oldlfmr	0.3	old leaf maint resp (prop of p.lfmr)
p.lffix	0.65	Fixed leaf cost (proportion) #0.65 is  HP
p.senrate	0.1	Senescence rate # was 0.023
p.maxsr	0.3	maximal senrate
p.maxtime	100	number of days simulated
p.MSGR	28	Max shoot growth rate (mg C/d) # HP is 28
p.mcr	6	max canopy radius (cm)
p.maxLAI	4	max leaf area index
r.IRR	0	Internal resource ratio
r.repprop	0	rep allocation proportion
r.shtprop	0	shoot allocation proportion
r.rtprop	0	root allocation proportion
r.Cfix	0.22	C fixation (init = rtCal+shtCal)
r.Cint	0.22	Internal C, after maint. metabolism satisfied
r.lfCrealo	0	C real. from old rts
r.lfCrealn	0	C real. from new rts
r.rtCal	0.11	root C allocation
r.stmCal	0.01	stem C allocation
r.lfCal	0.1	leaf C allocation
r.repCal	0	rep C allocation
r.sdCal	0	sd C allocation
r.rtmres	0	root maint resp
r.stmmres	0	stem maint resp
r.lfmres	0	leaf maint resp
r.repmres	0	rep maint resp
r.rtgres	0	root growth resp
r.shtgres	0	shoot growth resp
r.repgres	0	rep growth resp
r.Pup	0.0029333	P uptake (init = rtPal + shtPal)
r.Pint	0.0029333	Internal P
r.lfPrealo	0	P real. from old rts
r.lfPrealn	0	P real. from new rts
r.rtPal	0.001467	root P allocation
r.stmPal	0.0001333	stem P allocation
r.lfPal	0.001333	leaf P allocation
r.repPal	0	rep P allocation
r.sdPal	0	sd P allocation
r.srt	0	sen rate this is a storage vector for sen rate as it changes
s.Ctotal	0.008	Total C (rt, sht, extra)
s.rtC	0.004	rootC
s.repC	0	rep C
s.sdC	0	sd C
s.stmC	0.0004	stem C
s.newlfC	0.0036	C in new leaves
s.oldlfC	0	C in old old leaves (remobilizable)
s.Cextra	0	Extra C after timestep  init val represent sd resources
s.Ptotal	0.00008	Total P (rt, sht,extra)
s.rtP	0.00004	root P
s.repP	0	rep P
s.sdP	0	seed P
s.vsdP	0	P in viable seed
s.vsdC	0	C in viable seed
s.stmP	0.000004	stem P
s.newlfP	0.000036	P in new shoot
s.oldlfP	0	P in old shoot
s.Pextra	0	Extra P after timestep
s.CPal	0	C:P allocation ratio
s.told	0	t after which lf is old -calculated from p.shtold for eacht
