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Bioinformatic Scripts

This folder contains scripts used to perform various bioinformatic processes.

Retrieves AA sequence from GFF file given gene id.

Sorts output of NCBI Conserved Domain search (http://www.ncbi.nlm.nih.gov/Structure/cdd/wrpsb.cgi) to group all of the domains in a PR gene with it's Gene ID.

Gets start and stop positions of a gene locus from a GFF file given a Gene ID.