This folder contains scripts used to perform various bioinformatic processes.
PRaminoacidgetterASF.py
Python Source, 1.5 KB
Retrieves AA sequence from GFF file given gene id.
PRdomainsorterASF.py
Python Source, 1.7 KB
Sorts output of NCBI Conserved Domain search (http://www.ncbi.nlm.nih.gov/Structure/cdd/wrpsb.cgi) to group all of the domains in a PR gene with it's Gene ID.
PRstartstopfinderASF.py
Python Source, 1.4 KB
Gets start and stop positions of a gene locus from a GFF file given a Gene ID.
